1OI2

X-RAY STRUCTURE OF THE DIHYDROXYACETONE KINASE FROM ESCHERICHIA COLI

Structural Biology Knowledgebase: 1OI2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.201
  • R-Value Work: 0.172

Literature

Macromolecules
Sequence Display for 1OI2

Classification: KINASE

Total Structure Weight: 79442.20

Macromolecule Entities
Molecule Chains Length Organism Details
HYPOTHETICAL PROTEIN YCGT A, B 366 Escherichia coli Details: COVALENTLY BOUND DIHYDROXYACETONE
Gene Name(s): dhaK ycgT b1200 JW5187
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.201
  • R-Value Work: 0.172
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 96.51 α = 90.00
b = 97.41 β = 90.00
c = 85.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-04
  • Released Date: 2003-06-26
  • Deposition author(s): Siebold, C., Garcia-Alles, L.-F., Erni, B., Baumann, U.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor