1O3Y

Crystal structure of mouse ARF1 (delta17-Q71L), GTP form

Structural Biology Knowledgebase: 1O3Y SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 1O3Y

Classification: PROTEIN TRANSPORT

Total Structure Weight: 38998.52

Macromolecule Entities
Molecule Chains Length Organism Details
ADP-ribosylation factor 1 A, B 166 Mus musculus Fragment: RESIDUES 18-181
Mutation: Q71L
Gene Name(s): Arf1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GTP
Query on GTP

A, B GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.190
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 127.61 α = 90.00
b = 50.77 β = 113.37
c = 52.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-08
  • Released Date: 2003-05-20
  • Deposition author(s): Shiba, T., Kawasaki, M., Takatsu, H., Nogi, T., Matsugaki, N., Igarashi, N., Suzuki, M., Kato, R., Nakayama, K., Wakatsuki, S.
  • Previous versions: 1J2I

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4