1NJO

The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a short substrate analog ACCPuromycin (ACCP)

Structural Biology Knowledgebase: 1NJO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.7 Å
  • R-Value Free: 0.297
  • R-Value Work: 0.283

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1NJO

Classification: RIBOSOME

Total Structure Weight: 934834.31

Macromolecule Entities
Molecule Chains Length Organism Details
23S ribosomal RNA 0 2880 Deinococcus radiodurans
RNA ACC(Puromycin) 5 4 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PPU
Query on PPU
5 RNA LINKING C22 H30 N7 O8 P A

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.7 Å
  • R-Value Free: 0.297
  • R-Value Work: 0.283
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 169.90 α = 90.00
b = 410.40 β = 90.00
c = 697.10 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2003-01-02
  • Released Date: 2003-02-11
  • Deposition author(s): Bashan, A., Agmon, I., Zarivatch, R., Schluenzen, F., Harms, J.M., Berisio, R., Bartels, H., Hansen, H.A., Yonath, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4