Macromolecules
Sequence Display for 1NDE

Classification: TRANSCRIPTION

Total Structure Weight: 29595.60

Macromolecule Entities
Molecule Chains Length Organism Details
Estrogen receptor beta A 255 Homo sapiens Fragment: residues 256-501
Gene Name(s): ESR2 Gene View ESTRB NR3A2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MON
Query on MON

A 4-(2-{[4-{[3-(4-CHLOROPHENYL)PROPYL]SULFANYL}- 6-(1-PIPERAZINYL)-1,3,5-TRIAZIN-2-YL]AMINO}ETHYL)PHENOL
C24 H29 Cl N6 O S
AIBKIFHSQQYXLG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
MON IC50: 6 nM (100) BindingDB
Ki: 15 nM (100) BindingDB

N/A in BindingMoad
Ki: 15 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.240
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 65.56 α = 90.00
b = 65.56 β = 90.00
c = 239.30 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-09
  • Released Date: 2002-12-18
  • Deposition author(s): Henke, B.R., Consler, T.G., Go, N., Hale, R.L., Hohman, D.R., Jones, S.A., Lu, A.T., Moore, L.B., Moore, J.T., Orband-Miller, L.A., Robinett, R.G., Shearin, J., Spearing, P.K., Stewart, E.L., Turnbull, P.S., Weaver, S.L., Williams, S.P., Wisely, G.B., Lambert, M.H.

Revision History

  • Version 1_0: 2002-12-18

    Type: Initial release

  • Version 1_1: 2008-04-28

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Derived calculations, Version format compliance

  • Version 1_3: 2017-10-11

    Type: Refinement description