1NBS

Crystal structure of the specificity domain of Ribonuclease P RNA

Structural Biology Knowledgebase: 1NBS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.15 Å
  • R-Value Free: 0.307
  • R-Value Work: 0.280

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1NBS

Classification: RNA

Total Structure Weight: 105477.66

Macromolecule Entities
Molecule Chains Length Organism Details
RIBONUCLEASE P RNA A, B 155 Bacillus subtilis

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PB
Query on PB

A, B LEAD (II) ION
Pb
RVPVRDXYQKGNMQ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.15 Å
  • R-Value Free: 0.307
  • R-Value Work: 0.280
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 126.50 α = 90.00
b = 145.30 β = 90.00
c = 144.60 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2002-12-03
  • Released Date: 2003-02-18
  • Deposition author(s): Krasilnikov, A.S., Yang, X., Pan, T., Mondragon, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4