Structural basis of sequence-specific recruitment of histone deacetylases by Myocyte Enhancer Factor-2
DOI:10.2210/pdb1n6j/pdb   NDB ID: PD0363
1N6J
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 34207.61
    Molecule: 5'-D(*AP*GP*CP*TP*AP*TP*TP*TP*AP*TP*AP*AP*GP*C)-3'
    Polymer: 1 Type: dna Length: 14
    Chains: C
    Molecule: 5'-D(*GP*CP*TP*TP*AP*TP*AP*AP*AP*TP*AP*GP*CP*T)-3'
    Polymer: 2 Type: dna Length: 14
    Chains: D
    Molecule: Myocyte-specific enhancer factor 2B
    Polymer: 3 Type: protein Length: 93
    Chains: A, B
    Fragment: residues 2-91, MADS-box/MEF2S domain
    Organism: Homo sapiens
    Gene Names: Gene View for MEF2B XMEF2
    UniProtKB: Protein Feature View | Search PDB | Q02080  
    Molecule: Calcineurin-binding protein Cabin 1
    Polymer: 4 Type: protein Length: 35
    Chains: G
    Fragment: residues 101-132, Cabin1, MEF2-binding domain
    Organism: Homo sapiens
    Gene Names: Gene View for CABIN1 KIAA0330
    UniProtKB: Protein Feature View | Search PDB | Q9Y6J0  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 4
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:PD0363
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Han, A.,  Pan, F.,  Stroud, J.C.,  Youn, H.D.,  Liu, J.O.,  Chen, L.

    Deposition:   2002-11-11
    Release:   2003-11-11
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.20
    R-Value: 0.243 (obs.)
    R-Free: 0.268
    Space Group: P 41 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 70.14 α = 90.00 
    b = 70.14 β = 90.00 
    c = 151.88 γ = 90.00