1N6F

tricorn protease in complex with Z-Phe-diketo-Arg-Glu-Phe

Structural Biology Knowledgebase: 1N6F SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.247

Literature

Macromolecules
Sequence Display for 1N6F

Classification: HYDROLASE

Total Structure Weight: 735313.06

Macromolecule Entities
Molecule Chains Length Organism Details
tricorn protease A, B, C..., D, E, FA, B, C, D, E, F 1071 Thermoplasma acidophilum EC#: 3.4.21 IUBMB
Gene Name(s): tri Ta1490
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DKT
Query on DKT

A, B, C, D, E, F 4-[2-(3-BENZYLOXYCARBONYLAMINO-4-CYCLOHEXYL- 1-HYDROXY-2-OXO-BUTYLAMINO)-5-GUANIDINO-PENTANOYLAMINO]- 4-(1-CARBOXY-2-CYCLOHEXYL-ETHYLCARBAMOYL)- BUTYRIC ACID
C38 H57 N7 O10
LKCWMWZIRUHWBW-ZXYZSCNASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.247
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 95.67 α = 90.00
b = 244.55 β = 104.59
c = 158.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-10
  • Released Date: 2002-12-30
  • Deposition author(s): Kim, J.-S., Groll, M., Huber, R., Brandstetter, H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4