1MDN

WILD TYPE MYOGLOBIN WITH CO

Structural Biology Knowledgebase: 1MDN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.198

Literature

Macromolecules
Sequence Display for 1MDN

Classification: OXYGEN STORAGE / TRANSPORT

Total Structure Weight: 35230.16

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (MYOGLOBIN) A, B 153 Sus scrofa Mutation: V68N
Gene Name(s): MB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A, B PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.198
  • Space Group: I 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 122.00 α = 90.00
b = 42.17 β = 92.73
c = 91.50 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-08-12
  • Released Date: 1998-09-30
  • Deposition author(s): Murshudov, G.N., Krzywda, S., Brzozowski, A.M., Jaskolski, M., Scott, E.E., Klizas, S.A., Gibson, Q.H., Olson, J.S., Wilkinson, A.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4