1M27

Crystal structure of SAP/FynSH3/SLAM ternary complex

Structural Biology Knowledgebase: 1M27 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 1M27

Classification: SIGNALING PROTEIN TRANSFERASE

Total Structure Weight: 20110.72

Macromolecule Entities
Molecule Chains Length Organism Details
SH2 domain protein 1A A 104 Homo sapiens Gene Name(s): SH2D1A Gene View DSHP SAP
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Signaling lymphocytic activation molecule B 11 Homo sapiens Fragment: SLAM peptide (residues 276-286)
Gene Name(s): SLAMF1 Gene View SLAM
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Proto-oncogene tyrosine-protein kinase FYN C 61 Homo sapiens EC#: 2.7.10.2 IUBMB
Fragment: SH3 domain (residues 82-143)
Gene Name(s): FYN Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FLC
Query on FLC

A CITRATE ANION
C6 H5 O7
KRKNYBCHXYNGOX-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.213
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 52.91 α = 90.00
b = 52.91 β = 90.00
c = 183.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-06-21
  • Released Date: 2003-05-06
  • Deposition author(s): Chan, B., Griesbach, J., Song, H.K., Poy, F., Terhorst, C., Eck, M.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4