1L6L

Structures of Apolipoprotein A-II and a Lipid Surrogate Complex Provide Insights into Apolipoprotein-Lipid Interactions

Structural Biology Knowledgebase: 1L6L SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.198

Literature

Macromolecules
Sequence Display for 1L6L

Classification: LIPID TRANSPORT

Total Structure Weight: 297654.31

Macromolecule Entities
Molecule Chains Length Organism Details
Apolipoprotein A-II 1, 2, 3..., 4, 5, 6, 7, 8, A, B, C, D, E, F, G, H, I, J, K, L, M, N, P, Q, S, T, U, V, W, X, Y, Z1, 2, 3, 4, 5, 6, 7, 8, A, B, C, D, E, F, G, H, I, J, K, L, M, N, P, Q, S, T, U, V, W, X, Y, Z 77 Homo sapiens Gene Name(s): APOA2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BOG
Query on BOG

1, 2, 3, 4, 5, 6, 7, 8, A, B, C, D, E, F, G, H, I, J, K, L, M, N, P, Q, S, T, U, W, X, Y, Z B-OCTYLGLUCOSIDE
C14 H28 O6
HEGSGKPQLMEBJL-RKQHYHRCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.198
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 114.40 α = 90.70
b = 115.90 β = 96.20
c = 126.60 γ = 93.50

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-03-11
  • Released Date: 2002-10-02
  • Deposition author(s): Kumar, M.S., Carson, M., Hussain, M.M., Murthy, H.M.K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4