1KQ6

p47phox PX domain

Structural Biology Knowledgebase: 1KQ6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.18 Å
  • R-Value Free: 0.185
  • R-Value Work: 0.132

Literature

Macromolecules
Sequence Display for 1KQ6

Classification: PROTEIN BINDING

Total Structure Weight: 18178.18

Macromolecule Entities
Molecule Chains Length Organism Details
neutrophil cytosol factor 1 A 141 Homo sapiens Fragment: PX domain
Mutation: M1M, M27M, M57M, M102M, M141M
Gene Name(s): NCF1 Gene View NOXO2 SH3PXD1A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.18 Å
  • R-Value Free: 0.185
  • R-Value Work: 0.132
  • Space Group: I 41

Unit Cell:

Length (Å) Angle (°)
a = 70.96 α = 90.00
b = 70.96 β = 90.00
c = 55.31 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-01-04
  • Released Date: 2003-11-11
  • Deposition author(s): Wahl, M., Delbrueck, H., Oschkinat, H., Heinemann, U.

Revision History

  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4