1KO9

Native Structure of the Human 8-oxoguanine DNA Glycosylase hOGG1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 1KO9

Classification: HYDROLASE

Total Structure Weight: 39026.29

Macromolecule Entities
Molecule Chains Length Organism Details
8-oxoguanine DNA glycosylase A 345 Homo sapiens EC#: 3.2.2 IUBMB
Gene Name(s): OGG1 Gene View MMH MUTM OGH1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.206
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 105.51 α = 90.00
b = 105.51 β = 90.00
c = 47.60 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-12-20
  • Released Date: 2002-01-09
  • Deposition author(s): Bjoras, M., Seeberg, E., Luna, L., Pearl, L.H., Barrett, T.E.

Revision History

  • Version 1_0: 2002-01-09

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance