1KO1

Crystal structure of gluconate kinase

Structural Biology Knowledgebase: 1KO1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.218

Literature

Macromolecules
Sequence Display for 1KO1

Classification: TRANSFERASE

Total Structure Weight: 39215.77

Macromolecule Entities
Molecule Chains Length Organism Details
Gluconate kinase A, B 175 Escherichia coli EC#: 2.7.1.12 IUBMB
Gene Name(s): gntK b3437 JW3400
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.218
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.56 α = 90.00
b = 79.17 β = 105.20
c = 70.09 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-12-20
  • Released Date: 2002-05-29
  • Deposition author(s): Kraft, L., Sprenger, G.A., Lindqvist, Y.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4