1KGY

Crystal Structure of the EphB2-ephrinB2 complex

Structural Biology Knowledgebase: 1KGY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.243

Literature

Macromolecules
Sequence Display for 1KGY

Classification: TRANSFERASE / TRANSFERASE RECEPTOR

Total Structure Weight: 146290.98

Macromolecule Entities
Molecule Chains Length Organism Details
EPHRIN TYPE-B RECEPTOR 2 A, B, C, D 181 Mus musculus EC#: 2.7.10.1 IUBMB
Fragment: ligand-binding domain
Mutation: V27A
Gene Name(s): Ephb2 Epth3 Nuk Sek3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
EPHRIN-B2 E, F, G, H 138 Mus musculus Fragment: extracellular domain
Mutation: Q1049G
Gene Name(s): Efnb2 Elf2 Epl5 Eplg5 Htkl Lerk5
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.243
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 78.00 α = 69.00
b = 78.00 β = 75.00
c = 78.00 γ = 69.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-11-28
  • Released Date: 2002-05-28
  • Deposition author(s): Himanen, J-P., Rajashankar, K.R., Lackmann, M., Cowan, C.A., Henkemeyer, M., Nikolov, D.B.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4