1KD4

The Crystal Structure of r(GGUCACAGCCC)2, Barium form

Structural Biology Knowledgebase: 1KD4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.203

Literature

Macromolecules
Sequence Display for 1KD4

Classification: RNA

Total Structure Weight: 7237.00

Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*GP*GP*UP*CP*AP*CP*AP*GP*CP*CP*C)-3' A, B 11 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BA
Query on BA

A, B BARIUM ION
Ba
XDFCIPNJCBUZJN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.203
  • Space Group: P 43
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 39.99 α = 90.00
b = 39.99 β = 90.00
c = 52.62 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2001-11-12
  • Released Date: 2003-03-04
  • Deposition author(s): Kacer, V., Scaringe, S.A., Scarsdale, J.N., Rife, J.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4