1K9W

HIV-1(MAL) RNA Dimerization Initiation Site

Structural Biology Knowledgebase: 1K9W SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.227

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1K9W

Classification: RNA

Total Structure Weight: 29555.10

Macromolecule Entities
Molecule Chains Length Organism Details
HIV-1 DIS(Mal)UU RNA A, B, C, D 23 synthetic DIMERIZATION INITIATION SITE

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

B, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.227
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 122.07 α = 90.00
b = 27.32 β = 93.47
c = 92.10 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2001-10-31
  • Released Date: 2001-11-30
  • Deposition author(s): Ennifar, E., Walter, P., Ehresmann, B., Ehresmann, C., Dumas, P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4