1K9Q

YAP65 WW domain complexed to N-(n-octyl)-GPPPY-NH2

Structural Biology Knowledgebase: 1K9Q SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 20
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 1K9Q

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 5324.04

Macromolecule Entities
Molecule Chains Length Organism Details
65 kDa Yes-associated protein A 40 Homo sapiens Fragment: Wild type WW domain
Gene Name(s): YAP1 Gene View YAP65
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
WW domain binding protein-1 B 6 Homo sapiens Fragment: residues 149-153
Mutation: P3G

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OCT
Query on OCT

B N-OCTANE
C8 H18
TVMXDCGIABBOFY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
NH2
Query on NH2
B NON-POLYMER H2 N --

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 20
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-10-30
  • Released Date: 2001-12-28
  • Deposition author(s): Pires, J.R., Taha-Nejad, F., Toepert, F., Ast, T., Hoffmuller, U., Schneider-Mergener, J., Kuhne, R., Macias, M.J., Oschkinat, H.

Revision History

  • 2013-03-13
    Type: Other | Details: Remove PRD info on PRD molecule with WAIT status
  • 2012-12-12
    Type: Other | Details: Add PRD info
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4