1JTL

The crystal structure of d(GGCCAATTGG) Complexed with Distamycin

Structural Biology Knowledgebase: 1JTL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Observed: 0.197

Literature

Macromolecules
Sequence Display for 1JTL

Classification: DNA

Total Structure Weight: 6651.62

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3' A, B 10 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DMY
Query on DMY

B DISTAMYCIN A
DISTAMYCIN; STALLIMYCIN (Synonym)
C22 H27 N9 O4
UPBAOYRENQEPJO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Observed: 0.197
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 25.29 α = 90.00
b = 36.44 β = 90.00
c = 53.05 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2001-08-21
  • Released Date: 2002-08-09
  • Deposition author(s): Uytterhoeven, K., Van Meervelt, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4