1JQY

HEAT-LABILE ENTEROTOXIN B-PENTAMER WITH LIGAND BMSC-0010


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.14 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 1JQY

Classification: TOXIN

Total Structure Weight: 183714.89

Macromolecule Entities
Molecule Chains Length Organism Details
HEAT-LABILE ENTEROTOXIN B CHAIN D, E, F..., G, H, L, M, N, O, P, V, W, X, Y, ZD, E, F, G, H, L, M, N, O, P, V, W, X, Y, Z 103 Escherichia coli Gene Name(s): eltB ltpB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
A32
Query on A32

D, E, F, G, H, L, M, O, P, V, W, X, Y, Z (3-NITRO-5-(3-MORPHOLIN-4-YL-PROPYLAMINOCARBONYL)PHENYL)- GALACTOPYRANOSIDE
BMSC-0010 (Synonym)
C20 H29 N3 O10
CBPMHEKCQNCVNT-QTVCLEQKSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
A32 N/A in BindingDB
Ki: 12000 nM  BindingMOAD
Ki: 12000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.14 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.211
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 64.99 α = 90.00
b = 166.01 β = 92.13
c = 74.42 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-09
  • Released Date: 2002-05-08
  • Deposition author(s): Merritt, E.A., Hol, W.G.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4