Macromolecules
Sequence Display for 1JKE

Classification: HYDROLASE

Total Structure Weight: 64645.05

Macromolecule Entities
Molecule Chains Length Organism Details
D-Tyr-tRNATyr deacylase A, B, C, D 145 Escherichia coli Gene Name(s): dtd yihZ b3887 JW3858
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.209
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 118.30 α = 90.00
b = 82.93 β = 128.29
c = 83.51 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-07-12
  • Released Date: 2002-01-25
  • Deposition author(s): Ferri-Fioni, M.L., Schmitt, E., Soutourina, J., Plateau, P., Mechulam, Y., Blanquet, S.

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4