Human SRP19 in complex with helix 6 of Human SRP RNA
DOI:10.2210/pdb1jid/pdb   NDB ID: PR0054
1JID
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Signaling Protein/rna
    Structure Weight: 24468.30
    Molecule: HELIX 6 OF HUMAN SRP RNA
    Polymer: 1 Type: rna Length: 29
    Chains: B
    Mutation: C162U
    Molecule: SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN
    Polymer: 2 Type: protein Length: 128
    Chains: A
    Fragment: 24 C-TERMINAL RESIDUES TRUNCATED
    Organism: Homo sapiens
    Gene Name: Gene View for SRP19
    UniProtKB: Search PDB | P09132   Protein Feature View
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1D4R   29-Mer Fragment Of Human Srp RNA Helix 6 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    5BU
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    5BU C9 H12 Br N2 O9 P U rnaLinking
    A23
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    A23 C10 H13 N5 O9 P2 A rnaLinking
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:PR0054
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Wild, K.,  Sinning, I.,  Cusack, S.

    Deposition:   2001-07-02
    Release:   2001-10-19
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.80
    R-Value: 0.186 (work)
    R-Free: 0.222
    Space Group: C 2 2 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 55.81 α = 90.00 
    b = 109.78 β = 90.00 
    c = 89.46 γ = 90.00