1JAW

AMINOPEPTIDASE P FROM E. COLI LOW PH FORM

Structural Biology Knowledgebase: 1JAW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.182

Literature

Macromolecules
Sequence Display for 1JAW

Classification: PROLINE PEPTIDASE

Total Structure Weight: 49929.57

Macromolecule Entities
Molecule Chains Length Organism Details
AMINOPEPTIDASE P A 440 Escherichia coli EC#: 3.4.11.9 IUBMB
Mutation: F89Y
Details: ACTIVE SITE 2 MANGANESE
Gene Name(s): pepP b2908 JW2876
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.182
  • Space Group: I 41 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 139.71 α = 90.00
b = 139.71 β = 90.00
c = 230.87 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-12-22
  • Released Date: 1999-04-06
  • Deposition author(s): Wilce, M.C.J., Bond, C.S., Lilley, P.E., Dixon, N.E., Freeman, H.C., Guss, J.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4