1J9A

OLIGORIBONUCLEASE

Structural Biology Knowledgebase: 1J9A SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Observed: 0.185

Literature

Macromolecules
Sequence Display for 1J9A

Classification: HYDROLASE

Total Structure Weight: 21883.45

Macromolecule Entities
Molecule Chains Length Organism Details
OLIGORIBONUCLEASE A 184 Haemophilus influenzae EC#: 3.1 IUBMB
Mutation: M4M, M18M, M61M, M123M, M182M
Gene Name(s): orn HI_1715
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Observed: 0.185
  • Space Group: P 41 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 55.11 α = 90.00
b = 55.11 β = 90.00
c = 144.43 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-24
  • Released Date: 2003-06-24
  • Deposition author(s): Bonander, N., Tordova, M., Ladner, J.E., Eisenstein, E., Gilliland, G.L., Structure 2 Function Project (S2F)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values