1J1Y

Crystal Structure of PaaI from Thermus thermophilus HB8

Structural Biology Knowledgebase: 1J1Y SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 1J1Y

Classification: HYDROLASE

Total Structure Weight: 28620.44

Macromolecule Entities
Molecule Chains Length Organism Details
PaaI protein A, B 136 Thermus thermophilus Gene Name(s): TTHA0965
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.181
  • Space Group: P 43 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 57.88 α = 90.00
b = 57.88 β = 90.00
c = 139.61 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-24
  • Released Date: 2004-02-17
  • Deposition author(s): Kunishima, N., Sugahara, M., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4