1IBY

RED COPPER PROTEIN NITROSOCYANIN FROM NITROSOMONAS EUROPAEA

Structural Biology Knowledgebase: 1IBY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 1IBY

Classification: METAL BINDING PROTEIN

Total Structure Weight: 49654.91

Macromolecule Entities
Molecule Chains Length Organism Details
NITROSOCYANIN A, B, C, D 112 Nitrosomonas europaea Gene Name(s): NE0143
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEZ
Query on HEZ

A, B, C, D HEXANE-1,6-DIOL
C6 H14 O2
XXMIOPMDWAUFGU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CU
Query on CU

A, B, C, D COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.186
  • Space Group: H 3 2

Unit Cell:

Length (Å) Angle (°)
a = 96.38 α = 90.00
b = 96.38 β = 90.00
c = 279.77 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-03-29
  • Released Date: 2001-06-06
  • Deposition author(s): Lieberman, R.L., Arciero, D.M., Hooper, A.B., Rosenzweig, A.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4