1HZ1

RIBONUCLEASE T1 V16A MUTANT IN COMPLEX WITH MG2+

Structural Biology Knowledgebase: 1HZ1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 1HZ1

Classification: HYDROLASE

Total Structure Weight: 11454.25

Macromolecule Entities
Molecule Chains Length Organism Details
RIBONUCLEASE T1 A 104 Aspergillus niger EC#: 3.1.27.3 IUBMB
Mutation: V16A
Gene Name(s): rntA AO090011000118
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
2GP
Query on 2GP

A GUANOSINE-2'-MONOPHOSPHATE
C10 H14 N5 O8 P
WTIFIAZWCCBCGE-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.196
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 40.51 α = 90.00
b = 47.29 β = 90.00
c = 50.02 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-01-23
  • Released Date: 2001-01-31
  • Deposition author(s): De Swarte, J., De Vos, S., Langhorst, U., Steyaert, J., Loris, R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4