1HH4

RAC1-RHOGDI COMPLEX INVOLVED IN NADPH OXIDASE ACTIVATION

Structural Biology Knowledgebase: 1HH4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.256

Literature

Macromolecules
Sequence Display for 1HH4

Classification: SIGNALING PROTEIN / INHIBITOR

Total Structure Weight: 90728.73

Macromolecule Entities
Molecule Chains Length Organism Details
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 A, B 192 Homo sapiens Gene Name(s): RAC1 Gene View TC25 MIG5
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
RHO GDP-DISSOCIATION INHIBITOR 1 D, E 204 Homo sapiens Gene Name(s): ARHGDIA Gene View GDIA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A, B GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GER
Query on GER

D, E GERAN-8-YL GERAN
C20 H34
HSOYJGBJQAKCNA-CAIKYXSQSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.256
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 154.70 α = 90.00
b = 88.70 β = 90.00
c = 62.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-12-20
  • Released Date: 2001-08-28
  • Deposition author(s): Grizot, S., Faure, J., Fieschi, F., Vignais, P.V., Dagher, M.-C., Pebay-Peyroula, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4