1HDM

HISTOCOMPATIBILITY ANTIGEN HLA-DM

Structural Biology Knowledgebase: 1HDM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 1HDM

Classification: IMMUNE SYSTEM

Total Structure Weight: 44464.40

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (CLASS II HISTOCOMPATIBILITY ANTIGEN, M ALPHA CHAIN) A 201 Homo sapiens Fragment: EXTRACELLULAR DOMAINS
Mutation: ΔA95, ΔP96, ΔG113, I179P
Gene Name(s): HLA-DMA Gene View DMA RING6
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PROTEIN (CLASS II HISTOCOMPATIBILITY ANTIGEN, M BETA CHAIN) B 193 Homo sapiens Fragment: EXTRACELLULAR DOMAINS
Mutation: ΔE65, ΔF66, ΔG67, ΔV68, ΔL69, ΔR91, ΔP158
Gene Name(s): HLA-DMB Gene View DMB RING7
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.197
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 95.39 α = 90.00
b = 109.93 β = 90.00
c = 105.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-09-09
  • Released Date: 1999-09-10
  • Deposition author(s): Wiley, D.C., Mosyak, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4