1H7Q

DTDP-MANGANESE COMPLEX OF SPSA FROM BACILLUS SUBTILIS

Structural Biology Knowledgebase: 1H7Q SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.191

Literature

Macromolecules
Sequence Display for 1H7Q

Classification: TRANSFERASE

Total Structure Weight: 30596.90

Macromolecule Entities
Molecule Chains Length Organism Details
SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSA A 255 Bacillus subtilis Details: MAGNESIUM MANGANESE DTDP
Gene Name(s): spsA BSU37910 ipa-63d
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TYD
Query on TYD

A THYMIDINE-5'-DIPHOSPHATE
C10 H16 N2 O11 P2
UJLXYODCHAELLY-XLPZGREQSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.191
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 47.37 α = 90.00
b = 142.06 β = 90.00
c = 81.43 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-07-09
  • Released Date: 2001-12-13
  • Deposition author(s): Tarbouriech, N., Charnock, S.J., Davies, G.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4