1H2B

Crystal Structure of the Alcohol Dehydrogenase from the Hyperthermophilic Archaeon Aeropyrum pernix at 1.65A Resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.62 Å
  • R-Value Free: 0.203
  • R-Value Work: 0.168

Literature

Macromolecules
Sequence Display for 1H2B

Classification: OXIDOREDUCTASE

Total Structure Weight: 81183.81

Macromolecule Entities
Molecule Chains Length Organism Details
ALCOHOL DEHYDROGENASE A, B 359 Aeropyrum pernix EC#: 1.1.1.1 IUBMB
Gene Name(s): adh APE_2239.1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAJ
Query on NAJ

A, B NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM)
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
OCA
Query on OCA

A, B OCTANOIC ACID (CAPRYLIC ACID)
C8 H16 O2
WWZKQHOCKIZLMA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.62 Å
  • R-Value Free: 0.203
  • R-Value Work: 0.168
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 100.66 α = 90.00
b = 103.19 β = 90.00
c = 67.52 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-08-02
  • Released Date: 2003-08-28
  • Deposition author(s): Guy, J.E., Isupov, M.N., Littlechild, J.A.

Revision History

  • 2011-05-08
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance