1GYQ

CRYSTAL STRUCTURE OF GLYCOSOMAL GLYCERALDEHYDE FROM LEISHMANIA MEXICANA IN COMPLEX WITH N6-BENZYL-NAD

Structural Biology Knowledgebase: 1GYQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Work:

Literature

Macromolecules
Sequence Display for 1GYQ

Classification: OXIDOREDUCTASE

Total Structure Weight: 157787.98

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE) A, B, C, D 358 Leishmania mexicana EC#: 1.2.1.12 IUBMB
Gene Name(s): GAPG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NBD
Query on NBD

A, B, C, D N6-BENZYL-NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C28 H33 N7 O14 P2
PDNSIRRMIDXSBH-INGGVVRRSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Observed:
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 97.33 α = 90.00
b = 125.81 β = 90.00
c = 137.79 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-03-05
  • Released Date: 1999-03-16
  • Deposition author(s): Suresh, S., Hol, W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4