1GWX

MOLECULAR RECOGNITION OF FATTY ACIDS BY PEROXISOME PROLIFERATOR-ACTIVATED RECEPTORS

Structural Biology Knowledgebase: 1GWX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.303
  • R-Value Work: 0.246

Literature

Macromolecules
Sequence Display for 1GWX

Classification: TRANSCRIPTION

Total Structure Weight: 63198.42

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (PPAR-DELTA) A, B 271 Homo sapiens Fragment: LIGAND BINDING DOMAIN
Gene Name(s): PPARD Gene View NR1C2 PPARB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
433
Query on 433

A, B 2-(4-{3-[1-[2-(2-CHLORO-6-FLUORO-PHENYL)- ETHYL]-3-(2,3-DICHLORO-PHENYL)-UREIDO]-PROPYL}- PHENOXY)-2-METHYL-PROPIONIC ACID
GW2433 (Synonym)
C28 H28 Cl3 F N2 O4
YMWJDWJXIXITMD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
433 EC50: 190 - 410 nM (94 - 100) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.303
  • R-Value Work: 0.246
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 39.25 α = 90.00
b = 94.90 β = 98.00
c = 96.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-03-17
  • Released Date: 2000-03-17
  • Deposition author(s): Xu, H.E., Lambert, M.H., Montana, V.G., Park, D.J., Blanchard, S., Brown, P., Sternbach, D., Lehmann, J., Bruce, G.W., Willson, T.M., Kliewer, S.A., Milburn, M.V.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4