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THE STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A 53-NUCLEOTIDE RNA MOLECULE CONTAINING GAGUU REPEATS
 
 
DOI:10.2210/pdb1gtf/pdb   NDB ID: 1GTF
1GTF
 
Primary Citation
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  •  
    Move Section Molecular Description Hide
    Classification: RNA Binding Protein/rna
    Structure Weight: 204063.74
     
    Molecule:TRP RNA-BINDING ATTENUATION PROTEIN (TRAP)
    Polymer:1Type:polypeptide(L)Length:74
    Chains:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V
    Other Details:TWO PROTEIN 11-MERS (CHAINS A TO K AND L TO V), RESIDUES 1 - 75 IN EACH CHAIN (SOME N- AND C-TERMINAL RESIDUES MISSING DUE TO DISORDER)
    Molecule:(GAGUU)10GAG 53-NUCLEOTIDE RNA
    Polymer:2Type:polyribonucleotideLength:55
    Chains:W
     
     
  •  
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    Polymer: 1
    Scientific Name: Bacillus stearothermophilus Go to NCBI Taxonomy entry Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
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    Id Details
    1C9S  CRYSTAL STRUCTURE OF A COMPLEX OF TRP RNA -BINDINGATTENUATION PROTEIN WITH A 53-BASE SINGLE STRANDED RNACONTAINING ELEVEN GAG TRIPLETS SEPARATED BY AU DINUCLEOTIDES 
    1QAW  REGULATORY FEATURES OF THE TRP OPERON AND THE CRYSTALSTRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN FROMBACILLUS STEAROTHERMOPHILUS. 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    TRP     TRYPTOPHAN C11 H12 N2 O2 3DLigand Explorer Link out to Ligand Expos:TRP Link out to SuperLigands:TRP Link out to SuperHapten:TRP
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    TRP TRYPTOPHAN(type: lPeptideLinking) C11 H12 N2 O2 3D Ligand Explorer Link out to Ligand Expos:TRP Link out to SuperLigands:TRP Link out to SuperHapten:TRP 2D
     
     
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< Biological Assembly 1    Help >
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Biological assembly 1 assigned by authors and generated by PQS (software)
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Hopcroft, N.H.,   Wendt, A.L.,   Gollnick, P.,   Antson, A.A.

    Deposition:   2002-01-15
    Release:   2002-04-05
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 1.75
    R-Value: 0.194 (obs.)
    R-Free: 0.242
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 142.08 α = 90.00 
    b = 111.49 β = 117.28 
    c = 138.23 γ = 90.00