THE STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A 53-NUCLEOTIDE RNA MOLECULE CONTAINING GAGUU REPEATS
DOI:10.2210/pdb1gtf/pdb   NDB ID: 1GTF
1GTF
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: RNA Binding Protein/rna
    Structure Weight: 204063.74
    Molecule: TRP RNA-BINDING ATTENUATION PROTEIN (TRAP)
    Polymer: 1 Type: protein Length: 74
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V
    Details: TWO PROTEIN 11-MERS (CHAINS A TO K AND L TO V), RESIDUES 1 - 75 IN EACH CHAIN (SOME N- AND C-TERMINAL RESIDUES MISSING DUE TO DISORDER)
    Organism: Geobacillus stearothermophilus
    Gene Name: mtrB
    UniProtKB: Protein Feature View | Search PDB | Q9X6J6  
    Molecule: (GAGUU)10GAG 53-NUCLEOTIDE RNA
    Polymer: 2 Type: rna Length: 55
    Chains: W
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Bacillus stearothermophilus   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1C9S   CRYSTAL STRUCTURE OF A COMPLEX OF TRP RNA -BINDINGATTENUATION PROTEIN WITH A 53-BASE SINGLE STRANDED RNACONTAINING ELEVEN GAG TRIPLETS SEPARATED BY AU DINUCLEOTIDES 
    1QAW   REGULATORY FEATURES OF THE TRP OPERON AND THE CRYSTALSTRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN FROMBACILLUS STEAROTHERMOPHILUS. 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    TRP
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    TRP C11 H12 N2 O2
    TRYPTOPHAN
    TRP:1GTF
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:1GTF
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PQS (software)
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  •   Deposition Summary Hide
    Authors:   Hopcroft, N.H.,  Wendt, A.L.,  Gollnick, P.,  Antson, A.A.

    Deposition:   2002-01-15
    Release:   2002-04-05
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    BMRB  
      Structure Factors
    Resolution[Å]:   1.75
    R-Value: 0.194 (obs.)
    R-Free: 0.242
    Space Group: C 1 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 142.08 α = 90.00 
    b = 111.49 β = 117.28 
    c = 138.23 γ = 90.00