1GPI

CELLOBIOHYDROLASE CEL7D (CBH 58) FROM PHANEROCHAETE CHRYSOSPORIUM. CATALYTIC MODULE AT 1.32 ANG RESOLUTION

Structural Biology Knowledgebase: 1GPI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.32 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 1GPI

Classification: HYDROLASE

Total Structure Weight: 45998.76

Macromolecule Entities
Molecule Chains Length Organism Details
EXOGLUCANASE I A 431 Phanerochaete chrysosporium Fragment: CATALYTIC MODULE, RESIDUES 19-450
Mutation: N57D, D277V, ΔH265
Details: LINK NAG-ASN (NAG 435 AND ND2 ASN 286) CISPEP TYR 378, CISPEP PRO 379, SSBOND 1 CYS 19 CYS 25, SSBOND 2 CYS 50 CYS 71
Gene Name(s): cbh1-4 CBH CBHI.2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
A L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.32 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.213
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 86.31 α = 90.00
b = 46.63 β = 103.19
c = 99.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-11-05
  • Released Date: 2002-01-01
  • Deposition author(s): Munoz, I.G., Mowbray, S.L., Stahlberg, J.

Revision History

  • 2011-09-07
    Type: Polymer description | Details: COMPND
  • 2011-09-07
    Type: Other | Details: REMARK 525
  • 2011-09-07
    Type: Atom nomenclature | Details: HETATM
  • 2011-09-07
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2011-09-07
    Type: Version format compliance | Details: REMARK 4
  • 2011-09-07
    Type: Sequence database correspondence | Details: SEQADV,DBREF
  • 2011-09-07
    Type: Data collection | Details: REMARK 200
  • 2011-09-07
    Type: Non-polymer description | Details: HETSYN,FORMUL
  • 2011-09-07
    Type: Geometry validation | Details: REMARK 500