1GIK

POKEWEED ANTIVIRAL PROTEIN FROM SEEDS

Structural Biology Knowledgebase: 1GIK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.183

Literature

Macromolecules
Sequence Display for 1GIK

Classification: HYDROLASE

Total Structure Weight: 29898.21

Macromolecule Entities
Molecule Chains Length Organism Details
ANTIVIRAL PROTEIN S A 261 Phytolacca americana EC#: 3.2.2.22 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NDG
Query on NDG

A 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.183
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 84.76 α = 90.00
b = 78.05 β = 90.00
c = 91.57 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-02-07
  • Released Date: 2003-09-30
  • Deposition author(s): Zeng, Z.H., He, X.L., Li, H.M., Hu, Z., Wang, D.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update