1GD2

CRYSTAL STRUCTURE OF BZIP TRANSCRIPTION FACTOR PAP1 BOUND TO DNA

Structural Biology Knowledgebase: 1GD2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.230

Literature

Macromolecules
Sequence Display for 1GD2

Classification: transcription / DNA

Total Structure Weight: 66048.13


Macromolecule Entities
Molecule Chains Length Organism Details
TRANSCRIPTION FACTOR PAP1 E, F, G..., H, I, JE, F, G, H, I, J 70 Schizosaccharomyces pombe Fragment: LEUCINE ZIPPER DOMAIN
Gene Name(s): pap1 caf3 SPAC1783.07c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*AP*GP*GP*TP*TP*AP*CP*GP*TP*AP*AP*CP*C)-3') A, B, C, D 13 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.230
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 240.91 α = 90.00
b = 240.91 β = 90.00
c = 43.87 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-08-25
  • Released Date: 2000-10-02
  • Deposition author(s): Fujii, Y., Shimizu, T., Toda, T., Yanagida, M., Hakoshima, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4