1G1Q

Crystal structure of P-selectin lectin/EGF domains


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 1G1Q

Classification: IMMUNE SYSTEM MEMBRANE PROTEIN

Total Structure Weight: 76921.61

Macromolecule Entities
Molecule Chains Length Organism Details
P-SELECTIN A, B, C, D 162 Homo sapiens Fragment: LECTIN/EGF DOMAINS
Mutation: E158D
Gene Name(s): SELP Gene View GMRP GRMP
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MRD
Query on MRD

A, C (4R)-2-METHYLPENTANE-2,4-DIOL
C6 H14 O2
SVTBMSDMJJWYQN-RXMQYKEDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B, C, D CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.213
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 81.00 α = 90.00
b = 60.83 β = 103.58
c = 91.44 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-10-13
  • Released Date: 2001-10-13
  • Deposition author(s): Somers, W.S., Camphausen, R.T.

Revision History

  • Version 1_0: 2001-10-13

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance