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CRYSTAL STRUCTURE OF 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE BOUND TO D(CG(5BR)UACG)2
 
 
DOI:10.2210/pdb1fn1/pdb   NDB ID: DD0032
1FN1
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: DNA
    Structure Weight: 3913.32
     
    Molecule:DNA (5'-D(P*GP*(BRO)UP*AP*CP*G)-3')
    Polymer:1Type:polydeoxyribonucleotideLength:5
    Chains:A
    Other Details:KNOWN TO BE A GOOD SEQUENCE FOR INTERCALATION
    Molecule:DNA (5'-D(*CP*GP*(BRO)UP*AP*CP*G)-3')
    Polymer:2Type:polydeoxyribonucleotideLength:6
    Chains:B
    Other Details:KNOWN TO BE A GOOD SEQUENCE FOR INTERCALATION
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    8AD     9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE- 4-CARBOXAMIDE C20 H24 N4 O 3DLigand Explorer Link out to Ligand Expos:8AD Link out to SuperLigands:8AD Link out to SuperHapten:8AD
    CO     COBALT (II) ION Co 3DLigand Explorer Link out to Ligand Expos:CO Link out to SuperLigands:CO Link out to SuperHapten:CO
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    BRU 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE (parent: DU)(type: dnaLinking) C9 H12 Br N2 O8 P Link out to Ligand Expos:BRU Link out to SuperLigands:BRU Link out to SuperHapten:BRU 2D
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Adams, A.,   Guss, J.M.,   Collyer, C.A.,   Denny, W.A.,   Wakelin, L.P.G.

    Deposition:   2000-08-19
    Release:   2000-10-30
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 1.60
    R-Value: 0.230 (obs.)
    R-Free: 0.240
    Space Group: C 2 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 28.88 α = 90.00 
    b = 53.17 β = 90.00 
    c = 40.42 γ = 90.00