1FM4

CRYSTAL STRUCTURE OF THE BIRCH POLLEN ALLERGEN BET V 1L

Structural Biology Knowledgebase: 1FM4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.97 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 1FM4

Classification: ALLERGEN

Total Structure Weight: 18216.00

Macromolecule Entities
Molecule Chains Length Organism Details
MAJOR POLLEN ALLERGEN BET V 1-L A 159 Betula pendula Gene Name(s): BETV1L
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DXC
Query on DXC

A (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN- 24-OIC ACID
DEOXYCHOLIC ACID (Synonym)
C24 H40 O4
KXGVEGMKQFWNSR-LLQZFEROSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.97 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.197
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 33.13 α = 90.00
b = 57.23 β = 91.94
c = 38.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-08-16
  • Released Date: 2002-12-20
  • Deposition author(s): Markovic-Housley, Z., Degano, M., Lamba, D., von Roepenack-Lahaye, E., Clemens, S., Susani, M., Ferreira, F., Scheiner, O., Breiteneder, H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4