1FHY

PSORALEN CROSS-LINKED D(CCGCTAGCGG) FORMS HOLLIDAY JUNCTION

Structural Biology Knowledgebase: 1FHY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.276
  • R-Value Work: 0.245

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1FHY

Classification: DNA

Total Structure Weight: 6390.39

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*CP*GP*CP*TP*AP*GP*CP*GP*G)-3') A, B 10 synthetic DNA IS CROSS-LINKED BY PSORALEN

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PSO
Query on PSO

A 4'-HYDROXYMETHYL-4,5',8-TRIMETHYLPSORALEN
C15 H14 O4
RGJSDHXSAKMPNM-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.276
  • R-Value Work: 0.245
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 70.67 α = 90.00
b = 23.77 β = 130.11
c = 44.34 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2000-08-02
  • Released Date: 2001-04-21
  • Deposition author(s): Eichman, B.F., Mooers, B.H.M., Alberti, M., Hearst, J.E., Ho, P.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4