1F3W

RECOMBINANT RABBIT MUSCLE PYRUVATE KINASE

Structural Biology Knowledgebase: 1F3W SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.238

Literature

Macromolecules
Sequence Display for 1F3W

Classification: TRANSFERASE

Total Structure Weight: 465323.47

Macromolecule Entities
Molecule Chains Length Organism Details
PYRUVATE KINASE A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 530 Oryctolagus cuniculus EC#: 2.7.1.40 IUBMB
Gene Name(s): PKM Gene View PKM2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PYR
Query on PYR

A, B, C, D, E, F, G, H PYRUVIC ACID
C3 H4 O3
LCTONWCANYUPML-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A, B, C, D, E, F, G, H MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A, B, C, D, E, F, G, H POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.238
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 79.00 α = 95.90
b = 105.40 β = 92.80
c = 143.50 γ = 111.90

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-06-06
  • Released Date: 2001-10-03
  • Deposition author(s): Wooll, J.O., Friesen, R.H.E., White, M.A., Watowich, S.J., Fox, R.O., Lee, J.C., Czerwinski, E.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4