1F0I

THE FIRST CRYSTAL STRUCTURE OF A PHOSPHOLIPASE D

Structural Biology Knowledgebase: 1F0I SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.185
  • R-Value Work: 0.130

Literature

Macromolecules
Sequence Display for 1F0I

Classification: HYDROLASE

Total Structure Weight: 53912.70

Macromolecule Entities
Molecule Chains Length Organism Details
PHOSPHOLIPASE D A 504 Streptomyces sp. pmf EC#: 3.1.4.4 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.185
  • R-Value Work: 0.130
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 57.28 α = 90.00
b = 57.42 β = 93.17
c = 68.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-05-16
  • Released Date: 2001-05-16
  • Deposition author(s): Leiros, I., Secundo, F., Zambonelli, C., Servi, S., Hough, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name