1EZF

CRYSTAL STRUCTURE OF HUMAN SQUALENE SYNTHASE

Structural Biology Knowledgebase: 1EZF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 1EZF

Classification: TRANSFERASE

Total Structure Weight: 119367.51

Macromolecule Entities
Molecule Chains Length Organism Details
FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE A, B, C 340 Homo sapiens EC#: 2.5.1.21 IUBMB
Fragment: RESIDUES 31-370
Mutation: Q33R, D34N, S38N
Gene Name(s): FDFT1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IN0
Query on IN0

A, B, C N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) - 5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO- BENZO[E] [1,4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID
CP-320473 (Synonym)
C30 H31 Cl N2 O7
GXDQAFKUUPODFF-CAKYRVLISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
IN0 N/A in BindingDB
N/A in BindingMoad
IC50: 56 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.213
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 76.76 α = 90.00
b = 87.92 β = 90.00
c = 154.17 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-05-10
  • Released Date: 2000-10-18
  • Deposition author(s): Pandit, J., Danley, D.E., Schulte, G.K., Mazzalupo, S.M., Pauly, T.A., Hayward, C.M., Hamanaka, E.S., Thompson, J.F., Harwood, H.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4