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COMPLEX OF D(CCTAGG) WITH TETRA-[N-METHYL-PYRIDYL] PORPHYRIN
 
 
DOI:10.2210/pdb1em0/pdb   NDB ID: DD0027
1EM0
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: DNA
    Structure Weight: 9072.17
     
    Molecule:DNA (5'-D(*(CBR)P*CP*TP*AP*GP*G)-3')
    Polymer:1Type:polydeoxyribonucleotideLength:6
    Chains:A, B, C, D
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    MG     MAGNESIUM ION Mg 3DLigand Explorer Link out to Ligand Expos:MG Link out to SuperLigands:MG Link out to SuperHapten:MG
    PNI     TETRA[N-METHYL-PYRIDYL] PORPHYRIN-NICKEL C44 H36 N8 Ni 3DLigand Explorer Link out to Ligand Expos:PNI Link out to SuperLigands:PNI Link out to SuperHapten:PNI
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    CBR 5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE (parent: DC)(type: dnaLinking) C9 H13 Br N3 O7 P Link out to Ligand Expos:CBR Link out to SuperLigands:CBR Link out to SuperHapten:CBR 2D
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Neidle, S.,   Sanderson, M.,   Bennett, M.,   Krah, A.,   Wien, F.,   Garman, E.,   McKenna, R.

    Deposition:   2000-03-14
    Release:   2000-08-21
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 0.90
    R-Value: 0.152 (obs.)
    R-Free: 0.172
    Space Group: P 41
    Unit Cell:
      Length [Å] Angles [°]
    a = 32.21 α = 90.00 
    b = 32.21 β = 90.00 
    c = 62.26 γ = 90.00