1EGG

STRUCTURE OF A C-TYPE CARBOHYDRATE-RECOGNITION DOMAIN (CRD-4) FROM THE MACROPHAGE MANNOSE RECEPTOR

Structural Biology Knowledgebase: 1EGG SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.216

Literature

Macromolecules
Sequence Display for 1EGG

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 33721.70

Macromolecule Entities
Molecule Chains Length Organism Details
MACROPHAGE MANNOSE RECEPTOR A, B 147 Homo sapiens Fragment: CARBOHYDRATE-RECOGNITION DOMAIN 4
Mutation: P624G, E625I, E770D
Gene Name(s): MRC1 Gene View CLEC13D CLEC13DL MRC1L1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.216
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 129.89 α = 90.00
b = 38.28 β = 99.09
c = 54.81 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-02-15
  • Released Date: 2000-08-30
  • Deposition author(s): Feinberg, H., Park-Snyder, S., Kolatkar, A.R., Heise, C.T., Taylor, M.E., Weis, W.I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4