1EBO

CRYSTAL STRUCTURE OF THE EBOLA VIRUS MEMBRANE-FUSION SUBUNIT, GP2, FROM THE ENVELOPE GLYCOPROTEIN ECTODOMAIN

Structural Biology Knowledgebase: 1EBO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.239

Literature

Macromolecules
Sequence Display for 1EBO

Classification: Viral protein

Total Structure Weight: 92424.60

Macromolecule Entities
Molecule Chains Length Organism Details
EBOLA VIRUS ENVELOPE PROTEIN CHIMERA CONSISTING OF A FRAGMENT OF GCN4 ZIPPER CLONED N-TERMINAL TO A FRAGMENT OF GP2 A, B, C..., D, E, FA, B, C, D, E, F 131 Ebola virus sp. Fragment: GCN4 IS RESIDUE 3 - 32, GP2 IS RESIDUE 51 - 133
Mutation: ΔE57
Gene Name(s): GP
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, D, F ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

B, D CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.239
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 171.70 α = 90.00
b = 32.69 β = 119.23
c = 168.86 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-11-03
  • Released Date: 1999-07-02
  • Deposition author(s): Weissenhorn, W., Carfi, A., Lee, K.H., Skehel, J.J., Wiley, D.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4