NMR Ensemble

1E7J

HMG-D COMPLEXED TO A BULGE DNA

Structural Biology Knowledgebase: 1E7J SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 50
  • Conformers Submitted: 10
  • Selection Criteria: Low Values of the Noe Energy Term and Protein Located Within Minor Groove of DNA

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1E7J

Classification: PROTEIN / DNA

Total Structure Weight: 16453.07


Macromolecule Entities
Molecule Chains Length Organism Details
HIGH MOBILITY GROUP PROTEIN D A 74 Drosophila melanogaster Fragment: HMG-D DOMAIN
Gene Name(s): HmgD CG17950
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*AP*TP*AP*TP*TP*AP*AP*GP*AP*GP*CP*C)-3') B 14 synthetic
DNA (5'-D(*GP*GP*CP*TP*CP*AP*AP*TP*AP*TP*CP*G)-3') C 12 synthetic


Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 50
  • Conformers Submitted: 10
  • Selection Criteria: LOW VALUES OF THE NOE ENERGY TERM AND PROTEIN LOCATED WITHIN MINOR GROOVE OF DNA

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-08-29
  • Released Date: 2001-03-05
  • Deposition author(s): Cerdan, R., Payet, D., Yang, J.-C., Travers, A.A., Neuhaus, D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4