1E5I

DELTA-R306 DEACETOXYCEPHALOSPORIN C SYNTHASE COMPLEXED WITH IRON AND 2-OXOGLUTARATE.

Structural Biology Knowledgebase: 1E5I SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.227

Literature

Macromolecules
Sequence Display for 1E5I

Classification: OXIDOREDUCTASE

Total Structure Weight: 34248.21

Macromolecule Entities
Molecule Chains Length Organism Details
DEACETOXYCEPHALOSPORIN C SYNTHASE A 306 Streptomyces clavuligerus EC#: 1.14.20.1 IUBMB
Fragment: RESIDUES 1-306
Mutation: L50I
Gene Name(s): cefE
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AKG
Query on AKG

A 2-OXOGLUTARIC ACID
C5 H6 O5
KPGXRSRHYNQIFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE2
Query on FE2

A FE (II) ION
Fe
CWYNVVGOOAEACU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.227
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 105.79 α = 90.00
b = 105.79 β = 90.00
c = 71.22 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-07-26
  • Released Date: 2001-07-26
  • Deposition author(s): Lee, H.J., Lloyd, M.D., Harlos, K., Clifton, I.J., Baldwin, J.E., Schofield, C.J.

Revision History

  • 2011-08-24
    Type: Version format compliance | Details: REMARK 4
  • 2011-08-24
    Type: Refinement description | Details: REMARK 3
  • 2011-08-24
    Type: Other | Details: REMARK 465,REMARK 470,REMARK 525,REMARK 280
  • 2011-08-24
    Type: Non-polymer description | Details: HETSYN
  • 2011-08-24
    Type: Geometry validation | Details: REMARK 500
  • 2011-08-24
    Type: Polymer description | Details: COMPND
  • 2011-08-24
    Type: Source and taxonomy | Details: SOURCE
  • 2011-08-24
    Type: Atom nomenclature | Details: ATOM
  • 2011-08-24
    Type: Biological assembly | Details: REMARK 300,REMARK 350