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STRUCTURE OF HUMAN TRANSTHYRETIN COMPLEXED WITH BROMOPHENOLS: A NEW MODE OF BINDING
1E5A
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Protein Transport
    Structure Weight: 28216.60
    Molecule: TRANSTHYRETIN
    Polymer: 1 Type: protein Length: 127
    Chains: A, B
    Organism: Homo sapiens
    Gene Names: Gene View for TTR PALB
    UniProtKB: Protein Feature View | Search PDB | P02766  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human  
     
  •   Related PDB Entries Hide
    Identifier Details
    1BZ8  TRANSTHYRETIN (DEL VAL122) 
    1BZD  TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION 
    1BZE  TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION 
    1E3F  STRUCTURE OF HUMAN TRANSTHYRETIN COMPLEXED WITH BROMOPHENOLS: A NEW MODE OF BINDING 
    1E4H  STRUCTURE OF HUMAN TRANSTHYRETIN COMPLEXED WITH BROMOPHENOLS: A NEW MODE OF BINDING 
    1ETA   
    1ETB   
    1THA   
    1THC   
    1TLM   
    1TSH  TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION 
    1TTA   
    1TTB   
    1TTC   
    1TTR  TRANSTHYRETIN - V/122/I CARDIOMYOPATHIC MUTANT 
    2PAB   
    2ROX  TRANSTHYRETIN (ALSO CALLED PREALBUMIN) COMPLEX WITH THYROXINE (T4) 
    2ROY  TRANSTHYRETIN (ALSO CALLED PREALBUMIN) COMPLEX WITH 3',5'-DINITRO-N-ACETYL-L-THYRONINE 
    2TRH  TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION 
    2TRY  TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION 
    5TTR  LEU 55 PRO TRANSTHYRETIN CRYSTAL STRUCTURE 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    TBP
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    TBP C6 H3 Br3 O
    2,4,6-TRIBROMOPHENOL
    TBP:1E5A
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    TBP
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    TBP
    N/Ain BindingDB
    Kd: 23 nM - data from BindingMOAD  
    Kd: 23 nM - data from PDBbind  
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Ghosh, M.,  Meerts, I.A.T.M.,  Cook, A.,  Bergman, A.,  Brouwer, A.,  Johnson, L.N.

    Deposition:   2000-07-20
    Release:   2000-08-29
    Last Modified (REVDAT):   2011-08-10
     
  •   Revision History    Hide
    Mouse over text for details
    2011-08-10
    Atom nomenclature
    2011-08-10
    Biological assembly
    2011-08-10
    Version format compliance
    2011-08-10
    Polymer description
    2011-08-10
    Entry authorship
    2011-08-10
    Other
    2011-08-10
    Data collection
    2011-08-10
    Non-polymer description
    2011-08-10
    Geometry validation
    2011-08-10
    Function and keywords
    2011-08-10
    Citation
    2011-08-10
    Binding sites and description
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   1.80
    R-Value: 0.214 (obs.)
    R-Free: 0.262
    Space Group: P 21 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 42.80 α = 90.00 
    b = 84.90 β = 90.00 
    c = 64.40 γ = 90.00