1E33

CRYSTAL STRUCTURE OF AN ARYLSULFATASE A MUTANT P426L

Structural Biology Knowledgebase: 1E33 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.185

Literature

Macromolecules
Sequence Display for 1E33

Classification: HYDROLASE

Total Structure Weight: 52425.06

Macromolecule Entities
Molecule Chains Length Organism Details
ARYLSULFATASE A P 489 Homo sapiens EC#: 3.1.6.8 IUBMB
Mutation: Q215E, P426L
Gene Name(s): ARSA Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDG
Query on NDG

P 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

P MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
DDZ
Query on DDZ
P L-PEPTIDE LINKING C3 H7 N O4 ALA

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.185
  • Space Group: I 4 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 131.40 α = 90.00
b = 131.40 β = 90.00
c = 192.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-06-06
  • Released Date: 2001-05-25
  • Deposition author(s): Von Buelow, R., Schmidt, B., Dierks, T., Von Figura, K., Uson, I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4